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Bra005684 protein (Brassica rapa) - STRING interaction network
"Bra005684" - AT5G01500 in Brassica rapa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra005684AT5G01500 (E=1e-187) | mitochondrial substrate carrier family protein (404 aa)    
Predicted Functional Partners:
Bra025193
AT3G26210 (E=2e-234) CYP71B23 | CYP71B23; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding (501 aa)
           
  0.483
Bra019350
AT4G22880 (E=2e-182) LDOX, TDS4, TT18, ANS | LDOX (LEUCOANTHOCYANIDIN DIOXYGENASE); leucocyanidin oxygenase (357 aa)
           
  0.483
Bra013652
AT4G22880 (E=3e-184) LDOX, TDS4, TT18, ANS | LDOX (LEUCOANTHOCYANIDIN DIOXYGENASE); leucocyanidin oxygenase (358 aa)
           
  0.483
Bra034666
AT4G34950 (E=2e-243) | nodulin family protein (557 aa)
           
  0.476
Bra027457
AT5G42800 (E=3e-194) DFR, TT3, M318 | DFR (DIHYDROFLAVONOL 4-REDUCTASE); dihydrokaempferol 4-reductase (385 aa)
           
  0.470
Bra038496
AT4G16660 (E=0.0) | heat shock protein 70, putative / HSP70, putative (846 aa)
           
  0.447
Bra012696
AT4G16660 (E=0.0) | heat shock protein 70, putative / HSP70, putative (869 aa)
           
  0.447
Bra031368
AT1G22150 (E=4e-311) SULTR1;3 | SULTR1;3; sulfate transmembrane transporter (649 aa)
           
  0.442
Bra022623
AT4G08620 (E=1e-299) SULTR1;1, SULTR1.2 | SULTR1;1 (SULPHATE TRANSPORTER 1;1); sulfate transmembrane transporter (648 aa)
           
  0.442
Bra015641
AT1G78000 (E=0.0) SULTR1;2, SEL1 | SULTR1;2 (SULFATE TRANSPORTER 1;2); sulfate transmembrane transporter (655 aa)
           
  0.442
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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