STRINGSTRING
CYS7 protein (Brassica rapa) - STRING interaction network
"CYS7" - AT5G05110 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYS7AT5G05110 (E=1e-102) | cysteine protease inhibitor, putative / cystatin, putative (229 aa)    
Predicted Functional Partners:
Bra024935
AT5G47550 (E=4e-031) | cysteine protease inhibitor, putative / cystatin, putative (120 aa)
           
  0.605
Bra017478
AT5G47550 (E=4e-030) | cysteine protease inhibitor, putative / cystatin, putative (115 aa)
           
  0.571
Bra040651
AT4G16500 (E=6e-032) | cysteine protease inhibitor family protein / cystatin family protein (111 aa)
           
  0.541
Bra022213
AT3G17410 (E=8e-187) | serine/threonine protein kinase, putative (420 aa)
           
  0.499
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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