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Bra005871 protein (Brassica rapa) - STRING interaction network
"Bra005871" - AT5G05980 in Brassica rapa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra005871AT5G05980 (E=4e-079) ATDFB, DFB | ATDFB (A. THALIANA DHFS-FPGS HOMOLOG B); tetrahydrofolylpolyglutamate synthase (300 aa)    
Predicted Functional Partners:
Bra011157
AT4G30000 (E=6e-256) | dihydropterin pyrophosphokinase, putative / dihydropteroate synthase, putative / DHPS, putative (525 aa)
   
 
  0.969
Bra017662
AT2G16370 (E=2e-245) THY-1 | THY-1 (THYMIDYLATE SYNTHASE 1); dihydrofolate reductase/ thymidylate synthase ; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism (504 aa)
   
 
  0.968
Bra013079
AT2G16370 (E=4e-268) THY-1 | THY-1 (THYMIDYLATE SYNTHASE 1); dihydrofolate reductase/ thymidylate synthase ; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism (618 aa)
   
 
  0.968
Bra011543
AT2G16370 (E=2e-257) THY-1 | THY-1 (THYMIDYLATE SYNTHASE 1); dihydrofolate reductase/ thymidylate synthase ; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism (499 aa)
   
 
  0.968
Bra000581
AT2G21550 (E=6e-203) | bifunctional dihydrofolate reductase-thymidylate synthase, putative / DHFR-TS, putative (452 aa)
   
 
  0.968
Bra017844
AT4G37670 (E=4e-129) | GCN5-related N-acetyltransferase (GNAT) family protein / amino acid kinase family protein (569 aa)
         
  0.858
Bra011778
AT4G37670 (E=0.0) | GCN5-related N-acetyltransferase (GNAT) family protein / amino acid kinase family protein (614 aa)
         
  0.858
Bra011405
AT4G33010 (E=0.0) AtGLDP1 | AtGLDP1 (Arabidopsis thaliana glycine decarboxylase P-protein 1); catalytic/ glycine dehydrogenase (decarboxylating)/ pyridoxal phosphate binding (1045 aa)
       
  0.747
Bra035058
AT1G78680 (E=2e-155) ATGGH2 | ATGGH2 (gamma-glutamyl hydrolase 2); omega peptidase (344 aa)
         
  0.741
Bra035056
AT1G78670 (E=2e-141) ATGGH3 | ATGGH3 (gamma-glutamyl hydrolase 3); catalytic/ hydrolase/ omega peptidase (343 aa)
         
  0.741
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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