STRINGSTRING
Bra005921 protein (Brassica rapa) - STRING interaction network
"Bra005921" - AT5G07010 in Brassica rapa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra005921AT5G07010 (E=4e-164) ATST2A, ST2A | ST2A (SULFOTRANSFERASE 2A); hydroxyjasmonate sulfotransferase/ sulfotransferase (360 aa)    
Predicted Functional Partners:
Bra033755
AT5G44620 (E=2e-111) CYP706A3 | CYP706A3; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding (458 aa)
         
  0.549
Bra030620
AT1G05680 (E=4e-234) | UDP-glucoronosyl/UDP-glucosyl transferase family protein (453 aa)
     
 
  0.548
Bra015448
AT1G05680 (E=6e-219) | UDP-glucoronosyl/UDP-glucosyl transferase family protein (453 aa)
     
 
  0.548
Bra004788
AT2G43840 (E=2e-215) UGT74F1 | UDP-glucoronosyl/UDP-glucosyl transferase family protein (428 aa)
     
 
  0.548
Bra004787
AT2G43820 (E=1e-221) GT, UGT74F2 | UGT74F2 (UDP-GLUCOSYLTRANSFERASE 74F2); UDP-glucose-4-aminobenzoate acylglucosyltransferase/ UDP-glucosyltransferase/ UDP-glycosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups (451 aa)
     
 
  0.548
Bra000330
AT2G43820 (E=4e-213) GT, UGT74F2 | UGT74F2 (UDP-GLUCOSYLTRANSFERASE 74F2); UDP-glucose-4-aminobenzoate acylglucosyltransferase/ UDP-glucosyltransferase/ UDP-glycosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups (449 aa)
     
 
  0.548
Bra017819
AT4G37370 (E=5e-241) CYP81D8 | CYP81D8; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding (498 aa)
     
 
  0.546
Bra028715
AT5G06900 (E=2e-235) CYP93D1 | CYP93D1; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding (1293 aa)
     
 
  0.545
Bra040690
AT3G53150 (E=2e-232) UGT73D1 | UGT73D1 (UDP-glucosyl transferase 73D1); UDP-glycosyltransferase/ transferase, transferring hexosyl groups (507 aa)
         
  0.537
Bra040355
AT3G07020 (E=1e-287) | UDP-glucose-sterol glucosyltransferase (UGT80A2) (638 aa)
         
  0.537
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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