STRINGSTRING
Bra005931 protein (Brassica rapa) - STRING interaction network
"Bra005931" - AT5G07300 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra005931AT5G07300 (E=2e-295) BON2 | BON2 (BONZAI 2); calcium-dependent phospholipid binding (587 aa)    
Predicted Functional Partners:
Bra032202
AT1G44110 (E=5e-175) CYCA1;1 | CYCA1;1 (Cyclin A1;1); cyclin-dependent protein kinase regulator (422 aa)
       
      0.908
Bra007581
AT3G61190 (E=2e-047) BAP1 | BAP1 (BON ASSOCIATION PROTEIN 1); phospholipid binding / protein binding (187 aa)
     
 
  0.688
Bra004936
AT2G45760 (E=1e-081) BAP2, BAL | BAP2 (BON ASSOCIATION PROTEIN 2) (201 aa)
     
 
  0.627
Bra000402
AT2G45760 (E=5e-064) BAP2, BAL | BAP2 (BON ASSOCIATION PROTEIN 2) (202 aa)
     
 
  0.627
Bra035239
AT4G11260 (E=6e-166) ATSGT1B, ETA3, RPR1, EDM1, SGT1B | SGT1B; protein binding (355 aa)
       
 
  0.432
Bra019295
AT4G23570 (E=1e-161) SGT1A | SGT1A; protein binding (343 aa)
       
 
  0.432
Bra013710
AT4G23570 (E=6e-123) SGT1A | SGT1A; protein binding (322 aa)
       
 
  0.432
Bra000741
AT4G11260 (E=9e-157) ATSGT1B, ETA3, RPR1, EDM1, SGT1B | SGT1B; protein binding (358 aa)
       
 
  0.432
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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