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Bra005938 protein (Brassica rapa) - STRING interaction network
"Bra005938" - AT5G07470 in Brassica rapa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
Bra005938AT5G07470 (E=5e-081) PMSR3, ATMSRA3 | PMSR3 (PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 3); oxidoreductase, acting on sulfur group of donors, disulfide as acceptor / peptide-methionine-(S)-S-oxide reductase (184 aa)    
Predicted Functional Partners:
Bra004639
AT2G41680 (E=7e-262) NTRC | NTRC (NADPH-DEPENDENT THIOREDOXIN REDUCTASE C); thioredoxin-disulfide reductase (521 aa)
     
  0.939
Bra000234
AT2G41680 (E=3e-246) NTRC | NTRC (NADPH-DEPENDENT THIOREDOXIN REDUCTASE C); thioredoxin-disulfide reductase (511 aa)
     
  0.939
Bra039683
AT1G53670 (E=5e-096) MSRB1, ATMSRB1 | MSRB1 (methionine sulfoxide reductase B 1); peptide-methionine-(S)-S-oxide reductase (204 aa)
 
 
  0.911
Bra038753
AT4G21860 (E=2e-082) MSRB2 | MSRB2 (methionine sulfoxide reductase B 2); peptide-methionine-(S)-S-oxide reductase (207 aa)
   
 
  0.891
Bra020868
AT4G21850 (E=5e-062) ATMSRB9 | methionine sulfoxide reductase domain-containing protein / SeIR domain-containing protein (144 aa)
   
 
  0.891
Bra013565
AT4G21860 (E=2e-079) MSRB2 | MSRB2 (methionine sulfoxide reductase B 2); peptide-methionine-(S)-S-oxide reductase (214 aa)
   
 
  0.891
Bra000806
AT4G04830 (E=3e-068) ATMSRB5 | methionine sulfoxide reductase domain-containing protein / SeIR domain-containing protein (142 aa)
   
 
  0.891
Bra004709
AT2G42580 (E=3e-140) TTL3, VIT | TTL3 (TETRATRICOPETIDE-REPEAT THIOREDOXIN-LIKE 3); binding / protein binding (657 aa)
     
  0.863
Bra029711
AT3G08690 (E=2e-081) UBC11, ATUBC11 | UBC11 (UBIQUITIN-CONJUGATING ENZYME 11); ubiquitin-protein ligase (310 aa)
       
  0.861
Bra040596
AT3G02730 (E=5e-085) TRXF1, ATF1 | TRXF1 (THIOREDOXIN F-TYPE 1); enzyme activator (181 aa)
     
  0.861
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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