STRINGSTRING
Bra006014 protein (Brassica rapa) - STRING interaction network
"Bra006014" - AT5G08680 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra006014AT5G08680 (E=1e-215) | ATP synthase beta chain, mitochondrial, putative ; Produces ATP from ADP in the presence of a proton gradient across the membrane (738 aa)    
Predicted Functional Partners:
Bra040490
AT2G07698 (E=1e-039) | ATP synthase alpha chain, mitochondrial, putative (99 aa)
 
  0.999
Bra018503
AT4G04640 (E=2e-150) ATPC1 | ATPC1; enzyme regulator (504 aa)
 
  0.999
Bra022908
AT2G33040 (E=2e-172) | ATP synthase gamma chain, mitochondrial (ATPC) (325 aa)
 
  0.999
Bra021826
AT2G33040 (E=1e-167) | ATP synthase gamma chain, mitochondrial (ATPC) (321 aa)
 
  0.999
Bra005531
AT2G33040 (E=2e-162) | ATP synthase gamma chain, mitochondrial (ATPC) (325 aa)
 
  0.999
Bra016652
AT1G15700 (E=7e-150) ATPC2 | ATPC2; enzyme regulator (379 aa)
 
  0.999
Bra029511
AT4G04640 (E=2e-165) ATPC1 | ATPC1; enzyme regulator (375 aa)
 
  0.999
Bra000802
AT4G04640 (E=4e-157) ATPC1 | ATPC1; enzyme regulator (374 aa)
 
  0.999
Bra024969
AT5G47030 (E=4e-099) | ATP synthase delta’ chain, mitochondrial (203 aa)
   
  0.999
Bra022092
AT5G47030 (E=9e-098) | ATP synthase delta’ chain, mitochondrial (200 aa)
   
  0.999
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
Server load: low (7%) [HD]