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Bra006090 protein (Brassica rapa) - STRING interaction network
"Bra006090" - AT5G11110 in Brassica rapa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra006090AT5G11110 (E=0.0) SPS1, ATSPS2F, KNS2 | ATSPS2F (SUCROSE PHOSPHATE SYNTHASE 2F); sucrose-phosphate synthase (1039 aa)    
Predicted Functional Partners:
Bra008695
AT5G15490 (E=1e-275) | UDP-glucose 6-dehydrogenase, putative (480 aa)
   
 
  0.963
Bra006303
AT5G15490 (E=4e-277) | UDP-glucose 6-dehydrogenase, putative (480 aa)
   
 
  0.963
Bra026011
AT1G16980 (E=0.0) ATTPS2, TPS2 | ATTPS2; alpha,alpha-trehalose-phosphate synthase (UDP-forming)/ transferase, transferring glycosyl groups (844 aa)
   
 
  0.956
Bra019043
AT1G78580 (E=3e-296) ATTPS1, TPS1 | ATTPS1 (TREHALOSE-6-PHOSPHATE SYNTHASE); alpha,alpha-trehalose-phosphate synthase (UDP-forming)/ transferase, transferring glycosyl groups (786 aa)
   
 
  0.956
Bra038548
AT2G18700 (E=0.0) ATTPS11, TPS11, ATTPSB | ATTPS11; transferase, transferring glycosyl groups (864 aa)
   
 
  0.952
Bra035049
AT1G78580 (E=0.0) ATTPS1, TPS1 | ATTPS1 (TREHALOSE-6-PHOSPHATE SYNTHASE); alpha,alpha-trehalose-phosphate synthase (UDP-forming)/ transferase, transferring glycosyl groups (950 aa)
   
 
  0.952
Bra031526
AT1G60140 (E=0.0) ATTPS10, TPS10 | ATTPS10 (trehalose phosphate synthase); transferase, transferring glycosyl groups / trehalose-phosphatase (857 aa)
   
 
  0.952
Bra030651
AT1G06410 (E=0.0) ATTPS7, TPS7, ATTPSA | ATTPS7; alpha,alpha-trehalose-phosphate synthase (UDP-forming)/ transferase, transferring glycosyl groups / trehalose-phosphatase (852 aa)
   
 
  0.952
Bra017888
AT1G60140 (E=0.0) ATTPS10, TPS10 | ATTPS10 (trehalose phosphate synthase); transferase, transferring glycosyl groups / trehalose-phosphatase (861 aa)
   
 
  0.952
Bra016328
AT1G23870 (E=0.0) ATTPS9, TPS9 | ATTPS9; transferase, transferring glycosyl groups / trehalose-phosphatase (868 aa)
   
 
  0.952
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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