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Bra006100 protein (Brassica rapa) - STRING interaction network
"Bra006100" - AT5G11490 in Brassica rapa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
Bra006100AT5G11490 (E=0.0) | adaptin family protein ; Subunit of clathrin-associated adaptor protein complex that plays a role in protein sorting in the late-Golgi/trans-Golgi network (TGN) and/or endosomes. The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules (840 aa)    
Predicted Functional Partners:
Bra010489
AT4G24550 (E=2e-250) | clathrin adaptor complexes medium subunit family protein (453 aa)
     
  0.980
Bra037603
AT5G22780 (E=0.0) | adaptin family protein (1014 aa)
     
  0.980
Bra002427
AT5G22780 (E=0.0) | adaptin family protein (1007 aa)
     
  0.980
Bra031528
AT1G60070 (E=9e-057) | binding / clathrin binding / protein binding / protein transporter (218 aa)
     
  0.979
Bra024739
AT1G31730 (E=1e-100) | epsilon-adaptin, putative (263 aa)
     
  0.979
Bra024627
AT1G23900 (E=0.0) GAMMA-ADAPTIN 1, Gamma-ADR | GAMMA-ADAPTIN 1 (GAMMA-ADAPTIN 1); binding / clathrin binding / protein binding / protein transporter (872 aa)
     
  0.979
Bra023199
AT1G31730 (E=0.0) | epsilon-adaptin, putative (938 aa)
     
  0.979
Bra012393
AT1G23900 (E=0.0) GAMMA-ADAPTIN 1, Gamma-ADR | GAMMA-ADAPTIN 1 (GAMMA-ADAPTIN 1); binding / clathrin binding / protein binding / protein transporter (874 aa)
     
  0.979
Bra031752
AT1G60780 (E=1e-237) HAP13 | HAP13 (HAPLESS 13); protein binding (424 aa)
     
  0.977
Bra031481
AT1G60780 (E=2e-242) HAP13 | HAP13 (HAPLESS 13); protein binding (428 aa)
     
  0.977
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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