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Bra006111 protein (Brassica rapa) - STRING interaction network
"Bra006111" - AT5G11720 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra006111AT5G11720 (E=0.0) | alpha-glucosidase 1 (AGLU1) (891 aa)    
Predicted Functional Partners:
Bra028933
AT5G56360 (E=3e-245) | calmodulin-binding protein (651 aa)
     
  0.936
Bra004690
AT2G42390 (E=5e-086) | protein kinase C substrate, heavy chain-related (217 aa)
     
  0.936
Bra002821
AT5G56360 (E=9e-257) | calmodulin-binding protein (641 aa)
     
  0.936
Bra035347
AT5G36890 (E=6e-271) BGLU42 | BGLU42 (BETA GLUCOSIDASE 42); beta-glucosidase/ catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds (490 aa)
       
  0.913
Bra034697
AT4G27830 (E=4e-229) BGLU10 | BGLU10 (BETA GLUCOSIDASE 10); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds (507 aa)
       
  0.913
Bra033352
AT1G02850 (E=6e-249) BGLU11 | BGLU11 (BETA GLUCOSIDASE 11); hydrolase, hydrolyzing O-glycosyl compounds (557 aa)
       
  0.913
Bra024709
AT1G26560 (E=6e-283) BGLU40 | BGLU40 (BETA GLUCOSIDASE 40); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds (508 aa)
       
  0.913
Bra021292
AT3G18080 (E=6e-261) BGLU44 | BGLU44 (B-S GLUCOSIDASE 44); (R)-amygdalin beta-glucosidase/ 4-methylumbelliferyl-beta-D-glucopyranoside beta-glucosidase/ beta-gentiobiose beta-glucosidase/ cellobiose glucosidase/ esculin beta-glucosidase/ hydrolase, hydrolyzing O-glycosyl compounds (514 aa)
       
  0.913
Bra021291
AT3G18080 (E=2e-258) BGLU44 | BGLU44 (B-S GLUCOSIDASE 44); (R)-amygdalin beta-glucosidase/ 4-methylumbelliferyl-beta-D-glucopyranoside beta-glucosidase/ beta-gentiobiose beta-glucosidase/ cellobiose glucosidase/ esculin beta-glucosidase/ hydrolase, hydrolyzing O-glycosyl compounds (561 aa)
       
  0.913
Bra016276
AT1G26560 (E=2e-283) BGLU40 | BGLU40 (BETA GLUCOSIDASE 40); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds (501 aa)
       
  0.913
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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