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Bra006199 protein (Brassica rapa) - STRING interaction network
"Bra006199" - AT5G13440 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
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Experiments
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Textmining
[Homology]
Score
Bra006199AT5G13440 (E=2e-151) | ubiquinol-cytochrome C reductase iron-sulfur subunit, mitochondrial, putative / Rieske iron-sulfur protein, putative ; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis (274 aa)    
Predicted Functional Partners:
Bra032991
AT3G27240 (E=1e-144) | cytochrome c1, putative (307 aa)
 
  0.999
Bra039089
AT3G27240 (E=8e-151) | cytochrome c1, putative (307 aa)
 
  0.999
Bra025260
AT3G27240 (E=9e-141) | cytochrome c1, putative (304 aa)
 
  0.999
Bra025544
AT5G40810 (E=6e-032) | cytochrome c1, putative (82 aa)
 
  0.999
Bra040079
AT4G32470 (E=6e-061) | ubiquinol-cytochrome C reductase complex 14 kDa protein, putative ; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain (122 aa)
     
  0.999
Bra020499
AT5G25450 (E=1e-050) | ubiquinol-cytochrome C reductase complex 14 kDa protein, putative ; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain (123 aa)
     
  0.999
Bra031411
AT1G03070 (E=4e-014) | glutamate binding (187 aa)
     
 
  0.998
Bra027224
AT3G15640 (E=4e-053) | cytochrome c oxidase family protein (124 aa)
     
 
  0.997
Bra027223
AT3G15640 (E=1e-039) | cytochrome c oxidase family protein (104 aa)
     
 
  0.997
Bra027222
AT3G15640 (E=5e-027) | cytochrome c oxidase family protein (152 aa)
     
 
  0.997
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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