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Bra006205 protein (Brassica rapa) - STRING interaction network
"Bra006205" - AT5G13530 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra006205AT5G13530 (E=0.0) KEG | KEG (KEEP ON GOING); protein binding / protein kinase/ ubiquitin-protein ligase (1608 aa)    
Predicted Functional Partners:
Bra029711
AT3G08690 (E=2e-081) UBC11, ATUBC11 | UBC11 (UBIQUITIN-CONJUGATING ENZYME 11); ubiquitin-protein ligase (310 aa)
       
  0.993
Bra000209
AT2G40860 (E=0.0) | protein kinase family protein / protein phosphatase 2C ( PP2C) family protein (655 aa)
   
0.984
Bra036257
AT4G02570 (E=0.0) ATCUL1, CUL1, AXR6 | ATCUL1 (ARABIDOPSIS THALIANA CULLIN 1); protein binding (986 aa)
     
  0.982
Bra033573
AT4G38630 (E=2e-141) RPN10, MCB1, ATMCB1, MBP1 | RPN10 (REGULATORY PARTICLE NON-ATPASE 10); peptide receptor (381 aa)
     
  0.976
Bra010735
AT4G38630 (E=8e-146) RPN10, MCB1, ATMCB1, MBP1 | RPN10 (REGULATORY PARTICLE NON-ATPASE 10); peptide receptor (383 aa)
     
  0.976
Bra034597
AT4G02570 (E=7e-295) ATCUL1, CUL1, AXR6 | ATCUL1 (ARABIDOPSIS THALIANA CULLIN 1); protein binding (731 aa)
     
  0.974
Bra033363
AT4G02570 (E=7e-264) ATCUL1, CUL1, AXR6 | ATCUL1 (ARABIDOPSIS THALIANA CULLIN 1); protein binding (778 aa)
     
  0.974
Bra033362
AT4G02570 (E=1e-256) ATCUL1, CUL1, AXR6 | ATCUL1 (ARABIDOPSIS THALIANA CULLIN 1); protein binding (716 aa)
     
  0.974
Bra032576
AT4G02570 (E=6e-295) ATCUL1, CUL1, AXR6 | ATCUL1 (ARABIDOPSIS THALIANA CULLIN 1); protein binding (738 aa)
     
  0.974
Bra032570
AT4G02570 (E=9e-090) ATCUL1, CUL1, AXR6 | ATCUL1 (ARABIDOPSIS THALIANA CULLIN 1); protein binding (696 aa)
     
  0.974
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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