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Bra006230 protein (Brassica rapa) - STRING interaction network
"Bra006230" - AT5G14010 in Brassica rapa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
Bra006230AT5G14010 (E=5e-024) | zinc finger (C2H2 type) family protein (154 aa)    
Predicted Functional Partners:
Bra015222
AT2G15560 (E=1e-165) | INVOLVED IN- response to oxidative stress; LOCATED IN- cellular_component unknown; CONTAINS InterPro DOMAIN/s- Protein of unknown function DUF537 (InterPro-IPR007491); BEST Arabidopsis thaliana protein match is- EDA32 (embryo sac development arrest 32) (TAIR-AT3G62210.1); Has 184 Blast hits to 179 proteins in 38 species- Archae - 0; Bacteria - 4; Metazoa - 60; Fungi - 26; Plants - 90; Viruses - 0; Other Eukaryotes - 4 (source- NCBI BLink). (468 aa)
           
  0.451
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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