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Bra006264 protein (Brassica rapa) - STRING interaction network
"Bra006264" - AT5G14710 in Brassica rapa
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
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[Homology]
Score
Bra006264AT5G14710 (E=1e-061) | FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- cellular_component unknown; EXPRESSED IN- 22 plant structures; EXPRESSED DURING- 13 growth stages; CONTAINS InterPro DOMAIN/s- Proteasome assembly chaperone 3 (InterPro-IPR018788); Has 85 Blast hits to 85 proteins in 29 species- Archae - 0; Bacteria - 0; Metazoa - 53; Fungi - 2; Plants - 27; Viruses - 0; Other Eukaryotes - 3 (source- NCBI BLink). (124 aa)    
Predicted Functional Partners:
Bra022371
AT3G18940 (E=1e-150) | clast3-related ; Chaperone protein which promotes assembly of the 20S proteasome as part of a heterodimer with PSMG1 (281 aa)
     
      0.909
Bra001727
AT3G18940 (E=3e-149) | clast3-related ; Chaperone protein which promotes assembly of the 20S proteasome as part of a heterodimer with PSMG1 (282 aa)
     
      0.909
Bra040713
AT1G47250 (E=1e-015) PAF2 | PAF2; endopeptidase/ peptidase/ threonine-type endopeptidase (132 aa)
       
      0.903
Bra035332
AT5G42790 (E=6e-131) PAF1, ATPSM30 | PAF1; endopeptidase/ peptidase/ threonine-type endopeptidase (271 aa)
       
      0.903
Bra027456
AT5G42790 (E=2e-131) PAF1, ATPSM30 | PAF1; endopeptidase/ peptidase/ threonine-type endopeptidase (275 aa)
       
      0.903
Bra014068
AT1G47250 (E=1e-130) PAF2 | PAF2; endopeptidase/ peptidase/ threonine-type endopeptidase (270 aa)
       
      0.903
Bra033011
AT3G27430 (E=9e-153) PBB1 | PBB1; endopeptidase/ peptidase/ threonine-type endopeptidase ; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (273 aa)
       
      0.902
Bra025276
AT5G40580 (E=4e-151) PBB2 | PBB2; endopeptidase/ peptidase/ threonine-type endopeptidase (551 aa)
       
      0.902
Bra024015
AT4G31300 (E=5e-127) PBA1 | PBA1; endopeptidase/ peptidase/ threonine-type endopeptidase ; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (233 aa)
     
      0.896
Bra011257
AT4G31300 (E=7e-127) PBA1 | PBA1; endopeptidase/ peptidase/ threonine-type endopeptidase ; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (233 aa)
     
      0.896
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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