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Bra006355 protein (Brassica rapa) - STRING interaction network
"Bra006355" - AT5G16450 in Brassica rapa
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
Bra006355AT5G16450 (E=1e-089) | dimethylmenaquinone methyltransferase family protein ; Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions (166 aa)    
Predicted Functional Partners:
Bra040743
AT4G16630 (E=2e-266) | DEAD/DEAH box helicase, putative (RH28) (874 aa)
       
 
  0.630
Bra040708
AT3G02065 (E=8e-221) | DEAD/DEAH box helicase family protein (502 aa)
       
 
  0.630
Bra040699
AT3G01540 (E=2e-242) DRH1, ATDRH1 | DRH1 (DEAD BOX RNA HELICASE 1); ATP-dependent RNA helicase/ ATPase (609 aa)
       
 
  0.630
Bra038650
AT5G63630 (E=4e-222) | DEAD box RNA helicase, putative (743 aa)
       
 
  0.630
Bra038492
AT4G16630 (E=5e-153) | DEAD/DEAH box helicase, putative (RH28) (908 aa)
       
 
  0.630
Bra038370
AT4G09730 (E=5e-076) | DEAD/DEAH box helicase, putative (361 aa)
       
 
  0.630
Bra038231
AT3G19760 (E=9e-220) | eukaryotic translation initiation factor 4A, putative / eIF-4A, putative / DEAD box RNA helicase, putative (408 aa)
       
 
  0.630
Bra037977
AT3G13920 (E=3e-222) EIF4A1, RH4, TIF4A1 | EIF4A1 (EUKARYOTIC TRANSLATION INITIATION FACTOR 4A1); ATP-dependent helicase/ translation initiation factor (412 aa)
       
 
  0.630
Bra037574
AT3G18600 (E=4e-242) | DEAD/DEAH box helicase, putative (566 aa)
       
 
  0.630
Bra036582
AT5G26742 (E=0.0) emb1138 | emb1138 (embryo defective 1138); ATP binding / ATP-dependent helicase/ RNA binding / helicase/ nucleic acid binding / zinc ion binding (743 aa)
       
 
  0.630
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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