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Bra006375.1-P protein (Brassica rapa) - STRING interaction network
"Bra006375.1-P" - AT2G20790 in Brassica rapa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Bra006375.1-PAT2G20790 (E=9e-280) | protein binding; Belongs to the adaptor complexes medium subunit family (613 aa)    
Predicted Functional Partners:
Bra035228.1-P
Beta-adaptin-like protein; Subunit of clathrin-associated adaptor protein complex that plays a role in protein sorting in the late-Golgi/trans-Golgi network (TGN) and/or endosomes. The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules (899 aa)
     
 
  0.942
Bra019302.1-P
Beta-adaptin-like protein; Subunit of clathrin-associated adaptor protein complex that plays a role in protein sorting in the late-Golgi/trans-Golgi network (TGN) and/or endosomes. The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules (880 aa)
     
 
  0.942
Bra000742.1-P
AT4G11360 (E=1e-058) RHA1B | RHA1B; protein binding / zinc ion binding (308 aa)
     
 
  0.942
Bra024005.1-P
Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (948 aa)
     
 
  0.883
Bra010234.1-P
Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (948 aa)
     
 
  0.883
Bra006100.1-P
Beta-adaptin-like protein; Subunit of clathrin-associated adaptor protein complex that plays a role in protein sorting in the late-Golgi/trans-Golgi network (TGN) and/or endosomes. The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules (840 aa)
     
 
  0.882
Bra003542.1-P
AT1G79990 (E=0.0) | protein binding / structural molecule (1092 aa)
     
   
  0.881
Bra031528.1-P
Uncharacterized protein; AT1G60070 (E=9e-057) | binding / clathrin binding / protein binding / protein transporter (218 aa)
     
 
  0.878
Bra024739.1-P
Uncharacterized protein; AT1G31730 (E=1e-100) | epsilon-adaptin, putative (263 aa)
     
 
  0.878
Bra024627.1-P
Uncharacterized protein; AT1G23900 (E=0.0) GAMMA-ADAPTIN 1, Gamma-ADR | GAMMA-ADAPTIN 1 (GAMMA-ADAPTIN 1); binding / clathrin binding / protein binding / protein transporter (872 aa)
     
 
  0.878
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica rapa, Brassica rapa L., field mustard
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