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Bra006381 protein (Brassica rapa) - STRING interaction network
"Bra006381" - AT5G16990 in Brassica rapa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra006381AT5G16990 (E=2e-167) | NADP-dependent oxidoreductase, putative (433 aa)    
Predicted Functional Partners:
Bra029472
AT1G64590 (E=1e-060) | short-chain dehydrogenase/reductase (SDR) family protein (220 aa)
     
 
  0.532
Bra015354
AT5G54500 (E=4e-024) FQR1 | FQR1 (FLAVODOXIN-LIKE QUINONE REDUCTASE 1); FMN binding / oxidoreductase, acting on NADH or NADPH, quinone or similar compound as acceptor (127 aa)
     
        0.511
Bra003241
AT3G56460 (E=7e-163) | oxidoreductase, zinc-binding dehydrogenase family protein (467 aa)
   
 
  0.507
Bra026424
AT4G27270 (E=2e-028) | quinone reductase family protein (94 aa)
     
        0.497
Bra029025
AT5G54500 (E=1e-102) FQR1 | FQR1 (FLAVODOXIN-LIKE QUINONE REDUCTASE 1); FMN binding / oxidoreductase, acting on NADH or NADPH, quinone or similar compound as acceptor (205 aa)
     
        0.497
Bra028316
AT5G54500 (E=2e-026) FQR1 | FQR1 (FLAVODOXIN-LIKE QUINONE REDUCTASE 1); FMN binding / oxidoreductase, acting on NADH or NADPH, quinone or similar compound as acceptor (228 aa)
     
        0.497
Bra028143
AT5G37690 (E=2e-108) | GDSL-motif lipase/hydrolase family protein (491 aa)
     
        0.497
Bra026424.1-P
AT4G27270 (E=2e-028) | quinone reductase family protein (94 aa)
     
        0.497
Bra026364
AT4G27270 (E=2e-062) | quinone reductase family protein (292 aa)
     
        0.497
Bra024671
AT4G27270 (E=3e-041) | quinone reductase family protein (222 aa)
     
        0.497
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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