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Bra006440 protein (Brassica rapa) - STRING interaction network
"Bra006440" - AT5G18120 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra006440AT5G18120 (E=4e-110) ATAPRL7 | ATAPRL7 (APR-like 7) (278 aa)    
Predicted Functional Partners:
Bra034466
AT1G62180 (E=3e-219) APR2, APSR, PRH43, PRH, ATAPR2 | APR2 (5’ADENYLYLPHOSPHOSULFATE REDUCTASE 2); adenylyl-sulfate reductase/ phosphoadenylyl-sulfate reductase (thioredoxin) (479 aa)
           
  0.400
Bra029505
AT4G04610 (E=1e-224) APR1, APR, PRH19, ATAPR1 | APR1 (APS REDUCTASE 1); adenylyl-sulfate reductase (457 aa)
           
  0.400
Bra019406
AT4G04610 (E=2e-210) APR1, APR, PRH19, ATAPR1 | APR1 (APS REDUCTASE 1); adenylyl-sulfate reductase (468 aa)
           
  0.400
Bra018502
AT4G04610 (E=3e-030) APR1, APR, PRH19, ATAPR1 | APR1 (APS REDUCTASE 1); adenylyl-sulfate reductase (172 aa)
           
  0.400
Bra013579
AT4G04610 (E=5e-207) APR1, APR, PRH19, ATAPR1 | APR1 (APS REDUCTASE 1); adenylyl-sulfate reductase (468 aa)
           
  0.400
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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