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Bra006513 protein (Brassica rapa) - STRING interaction network
"Bra006513" - AT5G19660 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra006513AT5G19660 (E=0.0) ATSBT6.1, S1P, ATS1P | S1P (SITE-1 PROTEASE); endopeptidase/ serine-type endopeptidase (1044 aa)    
Predicted Functional Partners:
Bra016959
AT3G56660 (E=3e-120) BZIP49 | BZIP49 (BASIC REGION/LEUCINE ZIPPER MOTIF PROTEIN 49); DNA binding / transcription factor (624 aa)
     
 
  0.940
Bra000742
AT4G11360 (E=1e-058) RHA1B | RHA1B; protein binding / zinc ion binding (308 aa)
     
  0.859
Bra034147
AT3G10800 (E=5e-105) BZIP28 | BZIP28; DNA binding / transcription factor (629 aa)
     
 
  0.818
Bra023224
AT3G10800 (E=2e-110) BZIP28 | BZIP28; DNA binding / transcription factor (593 aa)
     
 
  0.818
Bra015052
AT3G24530 (E=2e-260) | AAA-type ATPase family protein / ankyrin repeat family protein (482 aa)
   
  0.765
Bra039532
AT3G47110 (E=2e-165) | leucine-rich repeat transmembrane protein kinase, putative (959 aa)
   
  0.726
Bra039531
AT3G47090 (E=6e-148) | leucine-rich repeat transmembrane protein kinase, putative (967 aa)
   
  0.726
Bra039525
AT5G44700 (E=0.0) EDA23, GSO2 | GSO2 (GASSHO 2); ATP binding / protein binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase (1243 aa)
   
  0.726
Bra039232
AT2G24130 (E=0.0) | leucine-rich repeat transmembrane protein kinase, putative (992 aa)
   
  0.726
Bra039063
AT3G28040 (E=0.0) | leucine-rich repeat transmembrane protein kinase, putative (1014 aa)
   
  0.726
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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