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Bra006519 protein (Brassica rapa) - STRING interaction network
"Bra006519" - AT5G19820 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra006519AT5G19820 (E=0.0) emb2734 | emb2734 (embryo defective 2734); binding / lyase (1115 aa)    
Predicted Functional Partners:
Bra039416
AT3G05720 (E=1e-182) IMPA-7 | IMPA-7 (IMPORTIN ALPHA ISOFORM 7); binding / protein transporter (499 aa)
     
 
  0.944
Bra038043
AT4G16143 (E=3e-276) IMPA-2 | IMPA-2 (IMPORTIN ALPHA ISOFORM 2); binding / protein transporter (534 aa)
     
 
  0.944
Bra033534
AT4G16143 (E=8e-283) IMPA-2 | IMPA-2 (IMPORTIN ALPHA ISOFORM 2); binding / protein transporter (530 aa)
     
 
  0.944
Bra033342
AT1G02690 (E=3e-203) IMPA-6 | IMPA-6 (IMPORTIN ALPHA ISOFORM 6); binding / protein transporter (521 aa)
     
 
  0.944
Bra030771
AT1G09270 (E=3e-097) IMPA-4 | IMPA-4 (IMPORTIN ALPHA ISOFORM 4); binding / protein transporter (435 aa)
     
 
  0.944
Bra030765
AT1G09270 (E=5e-231) IMPA-4 | IMPA-4 (IMPORTIN ALPHA ISOFORM 4); binding / protein transporter (754 aa)
     
 
  0.944
Bra028852
AT5G03070 (E=3e-142) IMPA-9 | IMPA-9 (IMPORTIN ALPHA ISOFORM 9); binding (527 aa)
     
 
  0.944
Bra020649
AT3G06720 (E=1e-200) AT-IMP, ATKAP ALPHA, AIMP ALPHA, IMPA-1, IMPA1 | IMPA-1 (IMPORTIN ALPHA ISOFORM 1); binding / protein transporter (532 aa)
     
 
  0.944
Bra018570
AT1G09270 (E=6e-270) IMPA-4 | IMPA-4 (IMPORTIN ALPHA ISOFORM 4); binding / protein transporter (542 aa)
     
 
  0.944
Bra012741
AT4G16143 (E=7e-186) IMPA-2 | IMPA-2 (IMPORTIN ALPHA ISOFORM 2); binding / protein transporter (357 aa)
     
 
  0.944
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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