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Bra006530 protein (Brassica rapa) - STRING interaction network
"Bra006530" - AT5G20010 in Brassica rapa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Bra006530AT5G20010 (E=2e-118) RAN-1, RAN1, ATRAN1 | RAN-1; GTP binding / GTPase/ protein binding ; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle (221 aa)    
Predicted Functional Partners:
Bra001616
AT3G15980 (E=1e-093) | coatomer protein complex, subunit beta 2 (beta prime), putative (728 aa)
     
  0.978
Bra031555
AT1G07140 (E=2e-078) SIRANBP | SIRANBP; Ran GTPase binding (228 aa)
     
  0.978
Bra030675
AT1G07140 (E=8e-082) SIRANBP | SIRANBP; Ran GTPase binding (224 aa)
     
  0.978
Bra030387
AT1G52380 (E=1e-141) | Ran-binding protein 1 domain-containing protein / RanBP1 domain-containing protein (428 aa)
     
  0.978
Bra022775
AT2G30060 (E=1e-079) | Ran-binding protein 1b (RanBP1b) (221 aa)
     
  0.978
Bra018968
AT1G52380 (E=1e-036) | Ran-binding protein 1 domain-containing protein / RanBP1 domain-containing protein (89 aa)
     
  0.978
Bra018966
AT1G52380 (E=7e-110) | Ran-binding protein 1 domain-containing protein / RanBP1 domain-containing protein (397 aa)
     
  0.978
Bra015554
AT1G07140 (E=1e-072) SIRANBP | SIRANBP; Ran GTPase binding (220 aa)
     
  0.978
Bra029733
AT3G08943 (E=0.0) | binding / protein transporter (872 aa)
     
  0.976
Bra003054
AT5G53480 (E=0.0) | importin beta-2, putative (868 aa)
     
  0.976
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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