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Bra006551 protein (Brassica rapa) - STRING interaction network
"Bra006551" - AT5G20270 in Brassica rapa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra006551AT5G20270 (E=8e-162) HHP1 | HHP1 (HEPTAHELICAL TRANSMEMBRANE PROTEIN1); receptor (323 aa)    
Predicted Functional Partners:
Bra034246
AT3G26744 (E=3e-116) ICE1, ATICE1, SCRM | ICE1 (INDUCER OF CBF EXPRESSION 1); DNA binding / transcription activator/ transcription factor (418 aa)
       
 
  0.594
Bra032947
AT3G26744 (E=1e-121) ICE1, ATICE1, SCRM | ICE1 (INDUCER OF CBF EXPRESSION 1); DNA binding / transcription activator/ transcription factor (442 aa)
       
 
  0.594
Bra025226
AT3G26744 (E=2e-192) ICE1, ATICE1, SCRM | ICE1 (INDUCER OF CBF EXPRESSION 1); DNA binding / transcription activator/ transcription factor (497 aa)
       
 
  0.594
Bra019794
AT1G12860 (E=5e-122) SCRM2, ICE2 | SCRM2 (SCREAM 2); DNA binding / transcription factor (425 aa)
       
 
  0.594
Bra016749
AT1G12860 (E=2e-129) SCRM2, ICE2 | SCRM2 (SCREAM 2); DNA binding / transcription factor (433 aa)
       
 
  0.594
Bra033131
AT5G58784 (E=3e-095) | dehydrodolichyl diphosphate synthase (233 aa)
         
  0.442
Bra024508
AT2G17570 (E=4e-085) | undecaprenyl pyrophosphate synthetase family protein / UPP synthetase family protein (263 aa)
         
  0.442
Bra020354
AT5G58770 (E=4e-140) | dehydrodolichyl diphosphate synthase, putative / DEDOL-PP synthase, putative (306 aa)
         
  0.442
Bra020353
AT5G58782 (E=1e-129) | dehydrodolichyl diphosphate synthase, putative / DEDOL-PP synthase, putative (289 aa)
         
  0.442
Bra017212
AT5G58784 (E=1e-064) | dehydrodolichyl diphosphate synthase (294 aa)
         
  0.442
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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