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Bra006572 protein (Brassica rapa) - STRING interaction network
"Bra006572" - AT5G20720 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra006572AT5G20720 (E=9e-123) CPN20, CPN10, CHCPN10, ATCPN21, CPN21 | CPN20 (CHAPERONIN 20); calmodulin binding (253 aa)    
Predicted Functional Partners:
Bra011985
AT2G28000 (E=7e-275) CPN60A, CH-CPN60A, SLP | CPN60A (CHAPERONIN-60ALPHA); ATP binding / protein binding (585 aa)
 
 
  0.997
Bra034383
AT2G28000 (E=2e-273) CPN60A, CH-CPN60A, SLP | CPN60A (CHAPERONIN-60ALPHA); ATP binding / protein binding (585 aa)
 
 
  0.997
Bra000498
AT2G28000 (E=3e-254) CPN60A, CH-CPN60A, SLP | CPN60A (CHAPERONIN-60ALPHA); ATP binding / protein binding (535 aa)
 
 
  0.997
Bra030858
AT1G55490 (E=1e-307) CPN60B, LEN1 | CPN60B (CHAPERONIN 60 BETA); ATP binding / protein binding (689 aa)
 
 
  0.997
Bra028922
AT5G56500 (E=1e-301) | ATP binding / protein binding (591 aa)
 
 
  0.997
Bra011919
AT1G55490 (E=2e-308) CPN60B, LEN1 | CPN60B (CHAPERONIN 60 BETA); ATP binding / protein binding (608 aa)
 
 
  0.997
Bra001507
AT3G13470 (E=5e-301) | chaperonin, putative (590 aa)
 
 
  0.997
Bra023694
AT5G18820 (E=2e-288) EMB3007 | EMB3007 (embryo defective 3007); ATP binding / protein binding (578 aa)
 
 
  0.997
Bra012462
AT1G26230 (E=1e-301) | chaperonin, putative (607 aa)
 
 
  0.997
Bra001524
AT3G13860 (E=2e-295) HSP60-3A | HSP60-3A (HEAT SHOCK PROTEIN 60-3A); ATP binding / protein binding (572 aa)
 
 
  0.997
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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