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Bra006654 protein (Brassica rapa) - STRING interaction network
"Bra006654" - AT5G60590 in Brassica rapa
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Bra006654AT5G60590 (E=9e-052) | yrdC protein-related (132 aa)    
Predicted Functional Partners:
Bra039077
AT3G27440 (E=4e-243) | uracil phosphoribosyltransferase, putative / UMP pyrophosphorylase, putative / UPRTase, putative (788 aa)
   
   
  0.721
Bra032986
AT3G27190 (E=8e-255) | uracil phosphoribosyltransferase, putative / UMP pyrophosphorylase, putative / UPRTase, putative (483 aa)
   
   
  0.721
Bra030832
AT1G55810 (E=1e-152) | uracil phosphoribosyltransferase, putative / UMP pyrophosphorylase, putative / UPRTase, putative (450 aa)
   
   
  0.721
Bra026427
AT4G26510 (E=5e-253) | ATP binding / kinase/ phosphotransferase, alcohol group as acceptor / uracil phosphoribosyltransferase (470 aa)
   
   
  0.721
Bra025537
AT5G40870 (E=1e-237) AtUK/UPRT1 | AtUK/UPRT1 (Uridine kinase/Uracil phosphoribosyltransferase 1); ATP binding / kinase/ uracil phosphoribosyltransferase/ uridine kinase (480 aa)
   
   
  0.721
Bra025256
AT3G27190 (E=3e-253) | uracil phosphoribosyltransferase, putative / UMP pyrophosphorylase, putative / UPRTase, putative (483 aa)
   
   
  0.721
Bra002854
AT4G26510 (E=3e-244) | ATP binding / kinase/ phosphotransferase, alcohol group as acceptor / uracil phosphoribosyltransferase (468 aa)
   
   
  0.721
Bra024017
AT4G31210 (E=0.0) | DNA topoisomerase family protein ; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand (1177 aa)
         
  0.716
Bra011253
AT4G31210 (E=0.0) | DNA topoisomerase family protein ; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand (1189 aa)
         
  0.716
Bra004895
AT2G45270 (E=1e-225) | glycoprotease M22 family protein (479 aa)
   
 
  0.644
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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