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Bra006777 protein (Brassica rapa) - STRING interaction network
"Bra006777" - AT5G58260 in Brassica rapa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Bra006777AT5G58260 (E=3e-103) | Encodes subunit NDH-N of NAD(P)H-plastoquinone dehydrogenase complex (Ndh complex) present in the thylakoid membrane of chloroplasts. This subunit is thought to be required for Ndh complex assembly. (208 aa)    
Predicted Functional Partners:
Bra010822
ATCG01110 (E=5e-030) NDHH | Encodes the 49KDa plastid NAD(P)H dehydrogenase subunit H protein. Its transcription is regulated by an ndhF-specific plastid sigma factor, SIG4. (71 aa)
       
 
  0.956
Bra010621
AT4G37925 (E=9e-107) NDH-M | NDH-M (subunit NDH-M of NAD(P)H-plastoquinone dehydrogenase complex) (220 aa)
   
   
  0.766
Bra021172
AT3G16250 (E=2e-104) NDF4 | NDF4 (NDH-DEPENDENT CYCLIC ELECTRON FLOW 1); electron carrier/ iron-sulfur cluster binding (204 aa)
   
        0.566
Bra027180
AT3G16250 (E=6e-092) NDF4 | NDF4 (NDH-DEPENDENT CYCLIC ELECTRON FLOW 1); electron carrier/ iron-sulfur cluster binding (204 aa)
   
        0.565
Bra016189
AT1G70760 (E=5e-088) CRR23 | CRR23 ((chlororespiratory reduction 23) (195 aa)
     
   
  0.561
Bra007941
AT1G70760 (E=2e-090) CRR23 | CRR23 ((chlororespiratory reduction 23) (192 aa)
     
   
  0.561
Bra021447
AT2G47910 (E=1e-106) CRR6 | CRR6 (chlororespiratory reduction 6) (252 aa)
   
   
  0.561
Bra019259
AT4G23890 (E=4e-114) | unknown protein (243 aa)
   
   
  0.550
Bra011047
AT4G28660 (E=4e-086) PSB28 | PSB28 (PHOTOSYSTEM II REACTION CENTER PSB28 PROTEIN) (215 aa)
   
        0.550
Bra013741
AT4G23890 (E=1e-107) | unknown protein (242 aa)
   
   
  0.549
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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