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Bra006784 protein (Brassica rapa) - STRING interaction network
"Bra006784" - AT5G58070 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra006784AT5G58070 (E=4e-097) ATTIL, TIL | TIL (TEMPERATURE-INDUCED LIPOCALIN); binding / transporter (187 aa)    
Predicted Functional Partners:
Bra010795
AT1G30130 (E=4e-137) | unknown protein (306 aa)
 
          0.568
Bra014958
AT3G23530 (E=0.0) | cyclopropane fatty acid synthase, putative / CPA-FA synthase, putative (844 aa)
   
        0.568
Bra014951
AT3G23530 (E=3e-187) | cyclopropane fatty acid synthase, putative / CPA-FA synthase, putative (816 aa)
   
        0.568
Bra014950
AT3G23530 (E=4e-302) | cyclopropane fatty acid synthase, putative / CPA-FA synthase, putative (774 aa)
   
        0.568
Bra001914
AT3G23530 (E=0.0) | cyclopropane fatty acid synthase, putative / CPA-FA synthase, putative (876 aa)
   
        0.568
Bra023723
AT3G23530 (E=1e-062) | cyclopropane fatty acid synthase, putative / CPA-FA synthase, putative (380 aa)
 
          0.545
Bra033740
AT5G44360 (E=3e-261) | FAD-binding domain-containing protein (547 aa)
           
  0.467
Bra005609
AT2G32150 (E=5e-126) | haloacid dehalogenase-like hydrolase family protein (261 aa)
           
  0.467
Bra005340
AT2G35460 (E=8e-096) | harpin-induced family protein / HIN1 family protein / harpin-responsive family protein (233 aa)
           
  0.467
Bra025926
AT1G18180 (E=7e-156) | oxidoreductase, acting on the CH-CH group of donors (292 aa)
              0.437
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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