STRINGSTRING
Bra006807 protein (Brassica rapa) - STRING interaction network
"Bra006807" - AT5G57690 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra006807AT5G57690 (E=2e-262) ATDGK4, DGK4 | diacylglycerol kinase (482 aa)    
Predicted Functional Partners:
Bra004987
AT2G40116 (E=5e-283) | phosphoinositide-specific phospholipase C family protein (609 aa)
     
 
  0.906
Bra000168
AT2G40116 (E=1e-261) | phosphoinositide-specific phospholipase C family protein (606 aa)
     
 
  0.906
Bra040960
AT1G52570 (E=0.0) PLDALPHA2 | PLDALPHA2 (phosphlipase d alpha 2); phospholipase D ; Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond (812 aa)
         
  0.903
Bra034939
AT4G35790 (E=0.0) ATPLDDELTA, PLDDELTA | ATPLDDELTA; phospholipase D ; Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond (833 aa)
         
  0.903
Bra033225
AT2G42010 (E=0.0) PLDBETA1, PLDBETA | PLDBETA1 (PHOSPHOLIPASE D BETA 1); phospholipase D (1070 aa)
         
  0.903
Bra030375
AT1G52570 (E=0.0) PLDALPHA2 | PLDALPHA2 (phosphlipase d alpha 2); phospholipase D ; Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond (812 aa)
         
  0.903
Bra027209
AT3G15730 (E=0.0) PLDALPHA1, PLD | PLDALPHA1 (PHOSPHOLIPASE D ALPHA 1); phospholipase D ; Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond (810 aa)
         
  0.903
Bra022178
AT3G16785 (E=0.0) PLDP1, PLDZ1, PLDZETA1, PLD ZETA 1 | PLDP1 (PHOSPHOLIPASE D P1); phospholipase D (1072 aa)
         
  0.903
Bra021132
AT3G15730 (E=0.0) PLDALPHA1, PLD | PLDALPHA1 (PHOSPHOLIPASE D ALPHA 1); phospholipase D ; Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond (812 aa)
         
  0.903
Bra029697
AT5G58690 (E=9e-168) ATPLC5, PLC5 | phosphoinositide-specific phospholipase C family protein (564 aa)
     
 
  0.903
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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