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Bra006876 protein (Brassica rapa) - STRING interaction network
"Bra006876" - AT3G51780 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra006876AT3G51780 (E=4e-105) ATBAG4 | ATBAG4 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 4); protein binding (264 aa)    
Predicted Functional Partners:
Bra036700
AT2G19830 (E=7e-082) SNF7.2, VPS32 | SNF7.2 (212 aa)
       
      0.903
Bra024160
AT4G29160 (E=7e-067) SNF7.1 | SNF7.1 (213 aa)
       
      0.902
Bra038496
AT4G16660 (E=0.0) | heat shock protein 70, putative / HSP70, putative (846 aa)
       
  0.825
Bra012696
AT4G16660 (E=0.0) | heat shock protein 70, putative / HSP70, putative (869 aa)
       
  0.825
Bra041089
AT2G44440 (E=8e-039) | emsy N terminus domain-containing protein / ENT domain-containing protein (300 aa)
       
  0.782
Bra039679
AT1G79930 (E=0.0) HSP91 | HSP91; ATP binding (818 aa)
       
  0.782
Bra019840
AT1G11660 (E=0.0) | heat shock protein, putative (761 aa)
       
  0.782
Bra016825
AT1G11660 (E=7e-062) | heat shock protein, putative (255 aa)
       
  0.782
Bra014713
AT1G79920 (E=0.0) | ATP binding (814 aa)
       
  0.782
Bra038734
AT3G12580 (E=0.0) HSP70 | HSP70 (heat shock protein 70); ATP binding (650 aa)
     
  0.780
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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