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Bra006942 protein (Brassica rapa) - STRING interaction network
"Bra006942" - AT3G52720 in Brassica rapa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra006942AT3G52720 (E=8e-140) ATACA1, ACA1 | ACA1 (ALPHA CARBONIC ANHYDRASE 1); carbonate dehydratase/ zinc ion binding (306 aa)    
Predicted Functional Partners:
Bra024615
AT1G23730 (E=1e-109) ATBCA3, BCA3 | BCA3 (BETA CARBONIC ANHYDRASE 4); carbonate dehydratase/ zinc ion binding ; Reversible hydration of carbon dioxide (259 aa)
         
  0.753
Bra023485
AT5G14740 (E=2e-137) CA2, CA18, BETA CA2 | CA2 (CARBONIC ANHYDRASE 2); carbonate dehydratase/ zinc ion binding ; Reversible hydration of carbon dioxide (259 aa)
         
  0.753
Bra018698
AT1G23730 (E=1e-110) ATBCA3, BCA3 | BCA3 (BETA CARBONIC ANHYDRASE 4); carbonate dehydratase/ zinc ion binding ; Reversible hydration of carbon dioxide (259 aa)
         
  0.753
Bra016223
AT1G70410 (E=2e-134) ATBCA4, BCA4 | carbonic anhydrase, putative / carbonate dehydratase, putative ; Reversible hydration of carbon dioxide (258 aa)
         
  0.753
Bra007912
AT1G70410 (E=1e-135) ATBCA4, BCA4 | carbonic anhydrase, putative / carbonate dehydratase, putative ; Reversible hydration of carbon dioxide (258 aa)
         
  0.753
Bra034573
AT4G33580 (E=7e-132) ATBCA5, BCA5 | carbonic anhydrase family protein / carbonate dehydratase family protein (625 aa)
         
  0.737
Bra040520
AT3G01500 (E=2e-153) CA1 | CA1 (CARBONIC ANHYDRASE 1); carbonate dehydratase/ zinc ion binding ; Reversible hydration of carbon dioxide (333 aa)
         
  0.733
Bra039113
AT3G01500 (E=8e-149) CA1 | CA1 (CARBONIC ANHYDRASE 1); carbonate dehydratase/ zinc ion binding ; Reversible hydration of carbon dioxide (334 aa)
         
  0.733
Bra037001
AT4G33580 (E=1e-130) ATBCA5, BCA5 | carbonic anhydrase family protein / carbonate dehydratase family protein ; Reversible hydration of carbon dioxide (321 aa)
         
  0.733
Bra035461
AT1G58180 (E=3e-146) ATBCA6, BCA6 | carbonic anhydrase family protein / carbonate dehydratase family protein ; Reversible hydration of carbon dioxide (290 aa)
         
  0.733
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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