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Bra006957 protein (Brassica rapa) - STRING interaction network
"Bra006957" - AT2G19480 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra006957AT2G19480 (E=1e-079) NFA02, NFA2, NAP1;2 | NAP1;2 (NUCLEOSOME ASSEMBLY PROTEIN 1;2); DNA binding (227 aa)    
Predicted Functional Partners:
Bra012465
AT1G26170 (E=3e-295) | binding / protein transporter (951 aa)
     
 
  0.949
Bra018984
AT1G52740 (E=1e-068) HTA9 | HTA9 (HISTONE H2A PROTEIN 9); DNA binding (135 aa)
       
 
  0.898
Bra018984.1-P
AT1G52740 (E=1e-068) HTA9 | HTA9 (HISTONE H2A PROTEIN 9); DNA binding (135 aa)
       
 
  0.898
Bra014808
AT3G54560 (E=2e-062) HTA11 | HTA11; DNA binding (136 aa)
       
 
  0.898
Bra007080
AT3G54560 (E=1e-062) HTA11 | HTA11; DNA binding (136 aa)
       
 
  0.898
Bra003188
AT3G54560 (E=2e-055) HTA11 | HTA11; DNA binding (138 aa)
       
 
  0.898
Bra000097
AT3G54560 (E=2e-050) HTA11 | HTA11; DNA binding (134 aa)
       
 
  0.898
Bra026921
AT1G13160 (E=9e-292) | SDA1 family protein (808 aa)
     
      0.840
Bra025687
AT1G18800 (E=2e-056) NRP2 | NRP2 (NAP1-RELATED PROTEIN 2); DNA binding / chromatin binding / histone binding (233 aa)
     
 
  0.828
Bra036619
AT5G27670 (E=7e-042) HTA7 | HTA7 (HISTONE H2A 7); DNA binding (151 aa)
       
 
  0.767
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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