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Bra006966 protein (Brassica rapa) - STRING interaction network
"Bra006966" - AT3G53000 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra006966AT3G53000 (E=2e-154) AtPP2-A15 | AtPP2-A15 (Phloem protein 2-A15); carbohydrate binding (301 aa)    
Predicted Functional Partners:
Bra039888
AT1G42430 (E=5e-226) | unknown protein (411 aa)
           
  0.478
Bra035194
AT1G80130 (E=3e-095) | binding (306 aa)
           
  0.478
Bra008495
AT1G80130 (E=2e-091) | binding (302 aa)
           
  0.478
Bra013429
AT4G19850 (E=3e-062) | ATPP2-A2; carbohydrate binding (173 aa)
           
  0.410
Bra027586
AT5G45080 (E=2e-062) AtPP2-A6 | AtPP2-A6 (Phloem protein 2-A6); carbohydrate binding (306 aa)
           
  0.406
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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