STRINGSTRING
Bra007036 protein (Brassica rapa) - STRING interaction network
"Bra007036" - AT3G53970 in Brassica rapa
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra007036AT3G53970 (E=4e-049) | proteasome inhibitor-related (272 aa)    
Predicted Functional Partners:
Bra006205
AT5G13530 (E=0.0) KEG | KEG (KEEP ON GOING); protein binding / protein kinase/ ubiquitin-protein ligase (1608 aa)
       
    0.920
Bra040713
AT1G47250 (E=1e-015) PAF2 | PAF2; endopeptidase/ peptidase/ threonine-type endopeptidase (132 aa)
       
    0.882
Bra035332
AT5G42790 (E=6e-131) PAF1, ATPSM30 | PAF1; endopeptidase/ peptidase/ threonine-type endopeptidase (271 aa)
       
    0.882
Bra027456
AT5G42790 (E=2e-131) PAF1, ATPSM30 | PAF1; endopeptidase/ peptidase/ threonine-type endopeptidase (275 aa)
       
    0.882
Bra014068
AT1G47250 (E=1e-130) PAF2 | PAF2; endopeptidase/ peptidase/ threonine-type endopeptidase (270 aa)
       
    0.882
Bra033011
AT3G27430 (E=9e-153) PBB1 | PBB1; endopeptidase/ peptidase/ threonine-type endopeptidase ; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (273 aa)
       
    0.810
Bra025276
AT5G40580 (E=4e-151) PBB2 | PBB2; endopeptidase/ peptidase/ threonine-type endopeptidase (551 aa)
       
    0.810
Bra038919
AT1G56450 (E=2e-077) PBG1 | PBG1; peptidase/ threonine-type endopeptidase (148 aa)
       
    0.753
Bra038162
AT1G56450 (E=2e-133) PBG1 | PBG1; peptidase/ threonine-type endopeptidase ; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (245 aa)
       
    0.753
Bra027934
AT1G56450 (E=5e-110) PBG1 | PBG1; peptidase/ threonine-type endopeptidase (265 aa)
       
    0.753
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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