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Bra007041 protein (Brassica rapa) - STRING interaction network
"Bra007041" - AT3G54050 in Brassica rapa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Bra007041AT3G54050 (E=8e-202) | fructose-1,6-bisphosphatase, putative / D-fructose-1,6-bisphosphate 1-phosphohydrolase, putative / FBPase, putative (414 aa)    
Predicted Functional Partners:
Bra025920
AT1G18270 (E=0.0) | ketose-bisphosphate aldolase class-II family protein (1340 aa)
       
  0.976
Bra014473
AT3G60750 (E=0.0) | transketolase, putative (735 aa)
   
 
  0.969
Bra007555
AT3G60750 (E=0.0) | transketolase, putative (738 aa)
   
 
  0.969
Bra004898
AT2G45290 (E=0.0) | transketolase, putative (736 aa)
   
 
  0.969
Bra011884
AT4G38970 (E=1e-169) | fructose-bisphosphate aldolase, putative (409 aa)
     
 
  0.948
Bra031181
AT2G21330 (E=7e-209) | fructose-bisphosphate aldolase, putative (400 aa)
     
 
  0.947
Bra014340
AT2G01140 (E=4e-212) | fructose-bisphosphate aldolase, putative (389 aa)
     
 
  0.946
Bra027452
AT5G42740 (E=6e-182) | glucose-6-phosphate isomerase, cytosolic (PGIC) (542 aa)
     
 
  0.945
Bra019214
AT4G24620 (E=0.0) PGI1, PGI | PGI1 (PHOSPHOGLUCOSE ISOMERASE 1); glucose-6-phosphate isomerase (613 aa)
     
 
  0.945
Bra013819
AT4G24620 (E=1e-314) PGI1, PGI | PGI1 (PHOSPHOGLUCOSE ISOMERASE 1); glucose-6-phosphate isomerase (616 aa)
     
 
  0.945
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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