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Bra007066 protein (Brassica rapa) - STRING interaction network
"Bra007066" - AT3G54320 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra007066AT3G54320 (E=2e-105) WRI1, WRI, ASML1 | WRI1 (WRINKLED 1); DNA binding / transcription factor (412 aa)    
Predicted Functional Partners:
Bra006489
AT5G19000 (E=3e-177) ATBPM1 | ATBPM1 (BTB-POZ and MATH domain 1); protein binding (403 aa)
       
      0.618
Bra002200
AT5G19000 (E=2e-197) ATBPM1 | ATBPM1 (BTB-POZ and MATH domain 1); protein binding (400 aa)
       
      0.618
Bra036437
AT3G03740 (E=8e-203) ATBPM4 | ATBPM4 (BTB-POZ and MATH domain 4); protein binding (446 aa)
       
      0.612
Bra024680
AT1G26830 (E=0.0) CUL3A, ATCUL3A, ATCUL3, CUL3 | ATCUL3 (ARABIDOPSIS THALIANA CULLIN 3); protein binding / ubiquitin-protein ligase (732 aa)
       
      0.612
Bra017053
AT2G39760 (E=1e-188) ATBPM3, BPM3 | BPM3; protein binding (399 aa)
       
      0.612
Bra016291
AT1G26830 (E=0.0) CUL3A, ATCUL3A, ATCUL3, CUL3 | ATCUL3 (ARABIDOPSIS THALIANA CULLIN 3); protein binding / ubiquitin-protein ligase (732 aa)
       
      0.612
Bra006591
AT5G21010 (E=3e-210) ATBPM5 | ATBPM5 (BTB-POZ and MATH domain 5); protein binding (410 aa)
       
      0.612
Bra032890
AT1G28300 (E=5e-113) LEC2 | LEC2 (LEAFY COTYLEDON 2); DNA binding / transcription factor (354 aa)
     
   
  0.564
Bra030087
AT1G28300 (E=1e-112) LEC2 | LEC2 (LEAFY COTYLEDON 2); DNA binding / transcription factor (344 aa)
     
   
  0.564
Bra036722
AT2G19450 (E=1e-250) TAG1, AS11, ABX45, DGAT1, RDS1, ATDGAT | TAG1 (TRIACYLGLYCEROL BIOSYNTHESIS DEFECT 1); diacylglycerol O-acyltransferase (503 aa)
     
   
  0.539
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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