STRINGSTRING
Bra007092 protein (Brassica rapa) - STRING interaction network
"Bra007092" - AT4G00026 in Brassica rapa
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra007092AT4G00026 (E=1e-090) | FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- chloroplast; EXPRESSED IN- cultured cell; CONTAINS InterPro DOMAIN/s- Mitochondrial import inner membrane translocase, subunit Tim21 (InterPro-IPR013261); Has 168 Blast hits to 168 proteins in 84 species- Archae - 0; Bacteria - 0; Metazoa - 92; Fungi - 52; Plants - 20; Viruses - 0; Other Eukaryotes - 4 (source- NCBI BLink). (251 aa)    
Predicted Functional Partners:
Bra016036
AT1G72750 (E=1e-059) ATTIM23-2 | ATTIM23-2; P-P-bond-hydrolysis-driven protein transmembrane transporter/ protein transporter (191 aa)
       
 
  0.635
Bra008046
AT1G72750 (E=3e-072) ATTIM23-2 | ATTIM23-2; P-P-bond-hydrolysis-driven protein transmembrane transporter/ protein transporter (188 aa)
       
 
  0.635
Bra037095
AT1G55900 (E=2e-122) TIM50, emb1860 | TIM50 (355 aa)
     
   
  0.508
Bra030827
AT1G55900 (E=2e-145) TIM50, emb1860 | TIM50 (372 aa)
     
   
  0.508
Bra014335
AT2G01240 (E=3e-037) | reticulon family protein (RTNLB15) (120 aa)
           
  0.478
Bra030980
AT1G20350 (E=3e-053) ATTIM17-1 | ATTIM17-1; P-P-bond-hydrolysis-driven protein transmembrane transporter/ protein transporter (217 aa)
       
 
  0.443
Bra005199
AT1G20350 (E=2e-048) ATTIM17-1 | ATTIM17-1; P-P-bond-hydrolysis-driven protein transmembrane transporter/ protein transporter (225 aa)
       
 
  0.443
Bra016890
AT2G42210 (E=5e-080) ATOEP16-3, OEP16-3 | mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein (161 aa)
       
 
  0.422
Bra004675
AT2G42210 (E=7e-082) ATOEP16-3, OEP16-3 | mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein (160 aa)
       
 
  0.422
Bra031026
AT3G10110 (E=1e-068) MEE67 | MEE67 (maternal effect embryo arrest 67); P-P-bond-hydrolysis-driven protein transmembrane transporter/ protein transporter (168 aa)
       
 
  0.414
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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