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Bra007130 protein (Brassica rapa) - STRING interaction network
"Bra007130" - AT3G55040 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra007130AT3G55040 (E=5e-125) GSTL2 | GSTL2 (296 aa)    
Predicted Functional Partners:
Bra007087
AT3G54660 (E=1e-278) GR, EMB2360, ATGR2 | GR (GLUTATHIONE REDUCTASE); ATP binding / glutathione-disulfide reductase (563 aa)
     
  0.942
GR1
AT3G24170 (E=3e-234) ATGR1 | ATGR1 (glutathione-disulfide reductase); FAD binding / NADP or NADPH binding / glutathione-disulfide reductase/ oxidoreductase ; Maintains high levels of reduced glutathione in the cytosol (486 aa)
       
  0.942
Bra014801
AT3G54660 (E=5e-268) GR, EMB2360, ATGR2 | GR (GLUTATHIONE REDUCTASE); ATP binding / glutathione-disulfide reductase (615 aa)
       
  0.942
Bra001931
AT3G24170 (E=4e-241) ATGR1 | ATGR1 (glutathione-disulfide reductase); FAD binding / NADP or NADPH binding / glutathione-disulfide reductase/ oxidoreductase (484 aa)
       
  0.942
Bra036101
AT5G27380 (E=1e-113) GSH2, GSHB | GSH2 (GLUTATHIONE SYNTHETASE 2); glutathione synthase (458 aa)
         
  0.903
Bra009967
AT5G27380 (E=1e-118) GSH2, GSHB | GSH2 (GLUTATHIONE SYNTHETASE 2); glutathione synthase (463 aa)
         
  0.903
Bra007819
AT2G25080 (E=9e-111) ATGPX1 | ATGPX1 (GLUTATHIONE PEROXIDASE 1); glutathione peroxidase (233 aa)
     
  0.902
Bra033140
AT4G11600 (E=4e-107) ATGPX6, PHGPX, LSC803 | ATGPX6 (GLUTATHIONE PEROXIDASE 6); glutathione peroxidase (229 aa)
       
  0.900
Bra018232
AT2G31570 (E=1e-091) ATGPX2 | ATGPX2 (GLUTATHIONE PEROXIDASE 2); glutathione peroxidase (169 aa)
       
  0.900
Bra004409
AT2G48150 (E=6e-090) ATGPX4 | ATGPX4 (GLUTATHIONE PEROXIDASE 4); glutathione peroxidase (170 aa)
       
  0.900
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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