STRINGSTRING
Bra007167 protein (Brassica rapa) - STRING interaction network
"Bra007167" - AT3G55480 in Brassica rapa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra007167AT3G55480 (E=0.0) | adaptin family protein (1000 aa)    
Predicted Functional Partners:
Bra027924
AT1G56590 (E=5e-233) | clathrin adaptor complexes medium subunit family protein (411 aa)
     
  0.987
Bra032266
AT1G48760 (E=1e-271) delta-ADR | delta-ADR (delta-adaptin); binding / clathrin binding / protein binding / protein transporter ; Part of the AP-3 complex, an adaptor-related complex which seems to be clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane and may be directly involved in trafficking to the vacuole. It also function in maintaining the identity of lytic vacuoles and in regulating the transition between storage and lytic vacuoles (850 aa)
     
  0.986
Bra022309
AT1G48760 (E=0.0) delta-ADR | delta-ADR (delta-adaptin); binding / clathrin binding / protein binding / protein transporter ; Part of the AP-3 complex, an adaptor-related complex which seems to be clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane and may be directly involved in trafficking to the vacuole. It also function in maintaining the identity of lytic vacuoles and in regulating the transition between storage and lytic vacuoles (856 aa)
     
  0.984
Bra036855
AT3G50860 (E=6e-034) | clathrin adaptor complex small chain family protein (90 aa)
       
  0.980
Bra012884
AT3G50860 (E=7e-086) | clathrin adaptor complex small chain family protein (167 aa)
       
  0.980
Bra031528
AT1G60070 (E=9e-057) | binding / clathrin binding / protein binding / protein transporter (218 aa)
     
  0.964
Bra024739
AT1G31730 (E=1e-100) | epsilon-adaptin, putative (263 aa)
     
  0.964
Bra024627
AT1G23900 (E=0.0) GAMMA-ADAPTIN 1, Gamma-ADR | GAMMA-ADAPTIN 1 (GAMMA-ADAPTIN 1); binding / clathrin binding / protein binding / protein transporter (872 aa)
     
  0.964
Bra023199
AT1G31730 (E=0.0) | epsilon-adaptin, putative (938 aa)
     
  0.964
Bra012393
AT1G23900 (E=0.0) GAMMA-ADAPTIN 1, Gamma-ADR | GAMMA-ADAPTIN 1 (GAMMA-ADAPTIN 1); binding / clathrin binding / protein binding / protein transporter (874 aa)
     
  0.964
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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