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Bra007181 protein (Brassica rapa) - STRING interaction network
"Bra007181" - AT3G55640 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra007181AT3G55640 (E=2e-125) | mitochondrial substrate carrier family protein (356 aa)    
Predicted Functional Partners:
Bra032401
AT3G08570 (E=2e-261) | protein binding / signal transducer (607 aa)
           
  0.487
Bra007692
AT3G62650 (E=2e-058) | unknown protein (145 aa)
           
  0.487
Bra003503
AT3G62650 (E=5e-053) | unknown protein (145 aa)
           
  0.487
Bra038496
AT4G16660 (E=0.0) | heat shock protein 70, putative / HSP70, putative (846 aa)
           
  0.447
Bra012696
AT4G16660 (E=0.0) | heat shock protein 70, putative / HSP70, putative (869 aa)
           
  0.447
Bra020060
AT5G19760 (E=8e-161) | dicarboxylate/tricarboxylate carrier (DTC) (299 aa)
     
   
  0.435
Bra006516
AT5G19760 (E=4e-162) | dicarboxylate/tricarboxylate carrier (DTC) (299 aa)
     
   
  0.435
Bra002259
AT5G19760 (E=2e-085) | dicarboxylate/tricarboxylate carrier (DTC) (259 aa)
     
   
  0.435
Bra039633
AT5G56450 (E=1e-022) | mitochondrial substrate carrier family protein (155 aa)
         
  0.432
Bra039632
AT5G56450 (E=1e-022) | mitochondrial substrate carrier family protein (179 aa)
         
  0.432
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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