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Bra007210 protein (Brassica rapa) - STRING interaction network
"Bra007210" - AT3G56040 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra007210AT3G56040 (E=0.0) UGP3 | UGP3 (UDP-GLUCOSE PYROPHOSPHORYLASE 3) (874 aa)    
Predicted Functional Partners:
Bra018636
AT1G08310 (E=3e-159) | esterase/lipase/thioesterase family protein (320 aa)
           
  0.451
Bra036616
AT5G27710 (E=8e-146) | unknown protein (334 aa)
           
  0.406
Bra018819
AT1G49975 (E=7e-043) | unknown protein (130 aa)
           
  0.406
Bra018465
AT1G10040 (E=8e-092) | unknown protein (371 aa)
           
  0.406
Bra012618
AT2G22650 (E=1e-179) | FAD-dependent oxidoreductase family protein (426 aa)
           
  0.406
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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