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Bra007218 protein (Brassica rapa) - STRING interaction network
"Bra007218" - AT3G56130 in Brassica rapa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra007218AT3G56130 (E=6e-099) | biotin/lipoyl attachment domain-containing protein (270 aa)    
Predicted Functional Partners:
Bra000908
AT4G01900 (E=1e-084) PII, GLB1 | GLB1 (GLNB1 HOMOLOG); acetylglutamate kinase regulator (196 aa)
     
      0.561
Bra028597
AT5G10160 (E=7e-102) | beta-hydroxyacyl-ACP dehydratase, putative (223 aa)
     
   
  0.482
Bra006052
AT5G10160 (E=1e-101) | beta-hydroxyacyl-ACP dehydratase, putative (224 aa)
     
   
  0.482
Bra038539
AT2G22230 (E=2e-086) | beta-hydroxyacyl-ACP dehydratase, putative (221 aa)
     
   
  0.481
Bra015367
AT1G04940 (E=2e-133) TIC20 | TIC20 (TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 20) (276 aa)
   
          0.463
Bra025025
AT5G46290 (E=8e-254) KAS I | KAS I (3-KETOACYL-ACYL CARRIER PROTEIN SYNTHASE I); catalytic/ fatty-acid synthase/ transferase, transferring acyl groups other than amino-acyl groups (470 aa)
     
   
  0.421
Bra022029
AT5G46290 (E=3e-244) KAS I | KAS I (3-KETOACYL-ACYL CARRIER PROTEIN SYNTHASE I); catalytic/ fatty-acid synthase/ transferase, transferring acyl groups other than amino-acyl groups (472 aa)
     
   
  0.421
Bra017565
AT5G46290 (E=8e-247) KAS I | KAS I (3-KETOACYL-ACYL CARRIER PROTEIN SYNTHASE I); catalytic/ fatty-acid synthase/ transferase, transferring acyl groups other than amino-acyl groups (470 aa)
     
   
  0.421
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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