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Bra007235 protein (Brassica rapa) - STRING interaction network
"Bra007235" - AT3G56310 in Brassica rapa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra007235AT3G56310 (E=1e-236) | alpha-galactosidase, putative / melibiase, putative / alpha-D-galactoside galactohydrolase, putative (429 aa)    
Predicted Functional Partners:
Bra014765
AT3G55260 (E=8e-291) HEXO1, ATHEX2 | HEXO1 (BETA-HEXOSAMINIDASE 1); beta-N-acetylhexosaminidase/ hexosaminidase/ hydrolase, hydrolyzing O-glycosyl compounds (550 aa)
   
 
  0.919
Bra004121
AT1G65590 (E=6e-265) HEXO3, ATHEX1 | HEXO3 (BETA-HEXOSAMINIDASE 3); beta-N-acetylhexosaminidase/ hexosaminidase (534 aa)
   
 
  0.918
Bra003861
AT1G72990 (E=3e-262) BGAL17 | BGAL17 (beta-galactosidase 17); beta-galactosidase/ catalytic/ cation binding (682 aa)
         
  0.903
Bra035407
AT1G68560 (E=0.0) ATXYL1, XYL1 | XYL1 (ALPHA-XYLOSIDASE 1); alpha-N-arabinofuranosidase/ hydrolase, hydrolyzing O-glycosyl compounds / xylan 1,4-beta-xylosidase (927 aa)
       
  0.902
Bra006111
AT5G11720 (E=0.0) | alpha-glucosidase 1 (AGLU1) (891 aa)
       
  0.902
Bra004319
AT1G68560 (E=0.0) ATXYL1, XYL1 | XYL1 (ALPHA-XYLOSIDASE 1); alpha-N-arabinofuranosidase/ hydrolase, hydrolyzing O-glycosyl compounds / xylan 1,4-beta-xylosidase (926 aa)
       
  0.902
Bra004031
AT1G68560 (E=0.0) ATXYL1, XYL1 | XYL1 (ALPHA-XYLOSIDASE 1); alpha-N-arabinofuranosidase/ hydrolase, hydrolyzing O-glycosyl compounds / xylan 1,4-beta-xylosidase (924 aa)
       
  0.902
Bra032460
AT1G05590 (E=3e-287) HEXO2, ATHEX3 | HEXO2 (BETA-HEXOSAMINIDASE 2); beta-N-acetylhexosaminidase/ hexosaminidase/ hydrolase, hydrolyzing O-glycosyl compounds (582 aa)
     
 
  0.900
Bra022264
AT3G17940 (E=3e-163) | aldose 1-epimerase family protein ; Converts alpha-aldose to the beta-anomer (343 aa)
     
 
    0.899
Bra021285
AT3G17940 (E=2e-168) | aldose 1-epimerase family protein ; Converts alpha-aldose to the beta-anomer (342 aa)
     
 
    0.899
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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