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Bra007238 protein (Brassica rapa) - STRING interaction network
"Bra007238" - AT2G40510 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra007238AT2G40510 (E=4e-037) | 40S ribosomal protein S26 (RPS26A) (134 aa)    
Predicted Functional Partners:
Bra040980
ATCG00780 (E=1e-038) RPL14 | encodes a chloroplast ribosomal protein L14, a constituent of the large subunit of the ribosomal complex (171 aa)
   
  0.999
Bra029857
AT3G10620 (E=6e-093) ATNUDX26 | ATNUDX26 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 26); bis(5’-adenosyl)-pentaphosphatase/ bis(5’-nucleosyl)-tetraphosphatase (asymmetrical) (336 aa)
     
  0.999
Bra015299
AT1G04270 (E=1e-082) RPS15 | RPS15 (CYTOSOLIC RIBOSOMAL PROTEIN S15); structural constituent of ribosome (152 aa)
     
  0.999
Bra015299.1-P
AT1G04270 (E=1e-082) RPS15 | RPS15 (CYTOSOLIC RIBOSOMAL PROTEIN S15); structural constituent of ribosome (152 aa)
     
  0.999
Bra036285
AT1G02780 (E=3e-094) emb2386 | emb2386 (embryo defective 2386); structural constituent of ribosome (199 aa)
     
  0.999
Bra030509
AT1G02780 (E=5e-094) emb2386 | emb2386 (embryo defective 2386); structural constituent of ribosome (218 aa)
     
  0.999
Bra035862
AT5G63070 (E=5e-061) | 40S ribosomal protein S15, putative (158 aa)
     
  0.999
Bra006024
AT5G09510 (E=2e-054) | 40S ribosomal protein S15 (RPS15D) (118 aa)
     
  0.999
Bra028778
AT5G04800 (E=1e-063) | 40S ribosomal protein S17 (RPS17D) (179 aa)
     
  0.999
Bra009431
AT5G04800 (E=5e-061) | 40S ribosomal protein S17 (RPS17D) (136 aa)
     
  0.999
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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