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Bra007276 protein (Brassica rapa) - STRING interaction network
"Bra007276" - AT3G56850 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra007276AT3G56850 (E=2e-126) AREB3, DPBF3 | AREB3 (ABA-RESPONSIVE ELEMENT BINDING PROTEIN 3); DNA binding / transcription activator/ transcription factor (282 aa)    
Predicted Functional Partners:
Bra018417
AT1G10940 (E=6e-179) ASK1, SNRK2-4, SNRK2.4, SRK2A | SNRK2.4 (SNF1-RELATED PROTEIN KINASE 2.4); kinase (354 aa)
       
  0.958
Bra011481
AT4G33950 (E=3e-191) OST1, SNRK2-6, SRK2E, SNRK2.6, P44 | OST1 (OPEN STOMATA 1); calcium-dependent protein serine/threonine kinase/ kinase/ protein kinase (362 aa)
       
  0.956
Bra017615
AT4G33950 (E=6e-188) OST1, SNRK2-6, SRK2E, SNRK2.6, P44 | OST1 (OPEN STOMATA 1); calcium-dependent protein serine/threonine kinase/ kinase/ protein kinase (362 aa)
       
  0.949
Bra038652
AT5G63650 (E=3e-178) SNRK2-5, SNRK2.5, SRK2H | SNRK2.5 (SNF1-RELATED PROTEIN KINASE 2.5); kinase (357 aa)
       
  0.933
Bra031475
AT1G60940 (E=4e-175) SNRK2-10, SNRK2.10, SRK2B | SNRK2.10 (SNF1-RELATED PROTEIN KINASE 2.10); kinase (352 aa)
       
  0.933
Bra019436
AT3G44460 (E=6e-117) DPBF2, AtbZIP67 | DPBF2; DNA binding / transcription activator/ transcription activator binding / transcription factor (336 aa)
     
 
0.918
Bra011815
AT4G40010 (E=2e-157) SNRK2-7, SNRK2.7, SRK2F | SNRK2.7 (SNF1-RELATED PROTEIN KINASE 2.7); kinase (347 aa)
       
  0.898
Bra003650
AT1G78290 (E=1e-155) | serine/threonine protein kinase, putative (478 aa)
       
  0.898
Bra012113
AT5G66880 (E=1e-178) SNRK2-3, SNRK2.3, SRK2I | SNRK2.3 (SUCROSE NONFERMENTING 1(SNF1)-RELATED PROTEIN KINASE 2.3); kinase/ protein kinase (357 aa)
       
  0.606
Bra003445
AT4G01830 (E=0.0) PGP5 | PGP5 (P-GLYCOPROTEIN 5); ATPase, coupled to transmembrane movement of substances (1254 aa)
           
  0.470
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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