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Bra007296 protein (Brassica rapa) - STRING interaction network
"Bra007296" - AT3G57050 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra007296AT3G57050 (E=7e-195) CBL | CBL (cystathionine beta-lyase); cystathionine beta-lyase (403 aa)    
Predicted Functional Partners:
Bra023169
AT1G31230 (E=0.0) AK-HSDH I, AK-HSDH | AK-HSDH I (ASPARTATE KINASE-HOMOSERINE DEHYDROGENASE I); aspartate kinase/ homoserine dehydrogenase (909 aa)
   
 
  0.979
Bra013425
AT4G19710 (E=0.0) AK-HSDH II, AK-HSDH | bifunctional aspartate kinase/homoserine dehydrogenase, putative / AK-HSDH, putative (923 aa)
   
 
  0.979
Bra039708
AT4G14880 (E=2e-163) OASA1, CYTACS1 | OASA1 (O-ACETYLSERINE (THIOL) LYASE (OAS-TL) ISOFORM A1); cysteine synthase (322 aa)
   
  0.971
Bra037682
AT2G43750 (E=6e-180) OASB, ACS1, CPACS1, ATCS-B | OASB (O-ACETYLSERINE (THIOL) LYASE B); cysteine synthase (389 aa)
   
  0.971
Bra036448
AT3G03630 (E=6e-149) CS26 | CS26; cysteine synthase (393 aa)
   
  0.971
Bra014529
AT3G59760 (E=1e-177) OASC, ATCS-C | OASC (O-ACETYLSERINE (THIOL) LYASE ISOFORM C); ATP binding / cysteine synthase (422 aa)
   
  0.971
Bra014436
AT3G61440 (E=1e-182) ATCYSC1, ARATH;BSAS3;1, CYSC1 | CYSC1 (CYSTEINE SYNTHASE C1); L-3-cyanoalanine synthase/ cysteine synthase (368 aa)
   
  0.971
Bra007604
AT3G61440 (E=2e-181) ATCYSC1, ARATH;BSAS3;1, CYSC1 | CYSC1 (CYSTEINE SYNTHASE C1); L-3-cyanoalanine synthase/ cysteine synthase (368 aa)
   
  0.971
Bra004781
AT2G43750 (E=1e-187) OASB, ACS1, CPACS1, ATCS-B | OASB (O-ACETYLSERINE (THIOL) LYASE B); cysteine synthase (396 aa)
   
  0.971
Bra038025
AT1G55880 (E=1e-194) | pyridoxal-5’-phosphate-dependent enzyme, beta family protein (432 aa)
   
  0.967
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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