STRINGSTRING
Bra007301 protein (Brassica rapa) - STRING interaction network
"Bra007301" - AT3G57090 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra007301AT3G57090 (E=1e-061) BIGYIN, FIS1A | BIGYIN; binding (170 aa)    
Predicted Functional Partners:
Bra036991
AT4G33650 (E=0.0) ADL2, DRP3A | DRP3A (DYNAMIN-RELATED PROTEIN 3A); GTP binding / GTPase/ phosphoinositide binding (807 aa)
       
  0.922
Bra011458
AT4G33650 (E=0.0) ADL2, DRP3A | DRP3A (DYNAMIN-RELATED PROTEIN 3A); GTP binding / GTPase/ phosphoinositide binding (807 aa)
       
  0.922
Bra016679
AT1G14830 (E=0.0) ADL1C, ADL5, DRP1C | ADL1C (ARABIDOPSIS DYNAMIN-LIKE PROTEIN 1C); GTP binding / GTPase (614 aa)
       
  0.902
Bra038229
AT3G19720 (E=0.0) ARC5 | ARC5 (ACCUMULATION AND REPLICATION OF CHLOROPLAST 5); GTP binding / GTPase (786 aa)
       
  0.900
Bra038100
AT1G53140 (E=3e-275) | dynamin family protein (820 aa)
       
  0.899
Bra037643
AT2G44590 (E=6e-296) ADL1D | ADL1D (ARABIDOPSIS DYNAMIN-RELATED PROTEIN 1D); GTP binding / GTPase (618 aa)
       
  0.899
Bra037604
AT1G53140 (E=7e-131) | dynamin family protein (770 aa)
       
  0.899
Bra035433
AT1G59610 (E=0.0) ADL3, CF1 | ADL3 (ARABIDOPSIS DYNAMIN-LIKE 3); GTPase (1001 aa)
       
  0.899
Bra034947
AT5G42080 (E=2e-011) ADL1, ADL1A, AG68, DRP1A, RSW9 | ADL1 (ARABIDOPSIS DYNAMIN-LIKE PROTEIN); GTP binding / GTPase/ protein binding (121 aa)
       
  0.899
Bra034579
AT4G33650 (E=0.0) ADL2, DRP3A | DRP3A (DYNAMIN-RELATED PROTEIN 3A); GTP binding / GTPase/ phosphoinositide binding (807 aa)
       
  0.899
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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