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Bra007316 protein (Brassica rapa) - STRING interaction network
"Bra007316" - AT3G57280 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra007316AT3G57280 (E=2e-098) | unknown protein (217 aa)    
Predicted Functional Partners:
Bra012767
AT4G15760 (E=2e-190) MO1 | MO1 (MONOOXYGENASE 1); electron carrier/ oxidoreductase (398 aa)
           
  0.666
Bra007142
AT3G55120 (E=2e-107) TT5, A11, CFI | TT5 (TRANSPARENT TESTA 5); chalcone isomerase (251 aa)
           
  0.666
Bra038068
AT4G15760 (E=3e-120) MO1 | MO1 (MONOOXYGENASE 1); electron carrier/ oxidoreductase (398 aa)
           
  0.591
Bra037049
AT4G32650 (E=4e-290) ATKC1, KAT3 | ATKC1 (ARABIDOPSIS THALIANA K+ RECTIFYING CHANNEL 1); cyclic nucleotide binding / inward rectifier potassium channel (645 aa)
           
  0.504
Bra022476
AT1G65450 (E=4e-135) | transferase family protein (451 aa)
           
  0.504
Bra011367
AT4G32650 (E=3e-292) ATKC1, KAT3 | ATKC1 (ARABIDOPSIS THALIANA K+ RECTIFYING CHANNEL 1); cyclic nucleotide binding / inward rectifier potassium channel (651 aa)
           
  0.504
Bra000475
AT2G29400 (E=3e-177) TOPP1, PP1-AT | TOPP1 (TYPE ONE PROTEIN PHOSPHATASE 1); protein serine/threonine phosphatase (318 aa)
           
  0.473
Bra013423
AT4G19700 (E=1e-103) RING | RING; protein binding / zinc ion binding (296 aa)
           
  0.456
Bra012532
AT4G19700 (E=2e-111) RING | RING; protein binding / zinc ion binding (306 aa)
           
  0.456
Bra035098
AT1G79200 (E=1e-038) | unknown protein (156 aa)
           
  0.418
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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