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Bra007329 protein (Brassica rapa) - STRING interaction network
"Bra007329" - AT2G41790 in Brassica rapa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra007329AT2G41790 (E=1e-275) | peptidase M16 family protein / insulinase family protein (961 aa)    
Predicted Functional Partners:
Bra039994
AT2G03430 (E=5e-021) | ankyrin repeat family protein (74 aa)
     
      0.620
Bra017385
AT2G03430 (E=1e-115) | ankyrin repeat family protein (244 aa)
     
      0.620
Bra028882
AT1G12350 (E=2e-146) ATCOAB | ATCOAB (4-phospho-panto-thenoylcysteine synthetase); catalytic/ phosphopantothenate--cysteine ligase (317 aa)
       
      0.516
Bra009615
AT1G12350 (E=7e-139) ATCOAB | ATCOAB (4-phospho-panto-thenoylcysteine synthetase); catalytic/ phosphopantothenate--cysteine ligase (313 aa)
       
      0.516
Bra030405
AT1G51980 (E=7e-238) | mitochondrial processing peptidase alpha subunit, putative (504 aa)
     
 
  0.512
Bra022162
AT3G16480 (E=3e-213) MPPalpha | MPPalpha (mitochondrial processing peptidase alpha subunit); catalytic/ metal ion binding / metalloendopeptidase/ zinc ion binding (495 aa)
     
 
  0.512
Bra018939
AT1G51980 (E=7e-228) | mitochondrial processing peptidase alpha subunit, putative (506 aa)
     
 
  0.512
Bra014305
AT1G51980 (E=3e-229) | mitochondrial processing peptidase alpha subunit, putative (502 aa)
     
 
  0.512
Bra037404
AT4G00900 (E=0.0) ECA2, ATECA2 | ECA2 (ER-TYPE CA2+-ATPASE 2); calcium-transporting ATPase (1054 aa)
     
   
  0.418
Bra031593
AT1G07670 (E=0.0) ATECA4, ECA4 | calcium-transporting ATPase (1060 aa)
     
   
  0.418
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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