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Bra007361 protein (Brassica rapa) - STRING interaction network
"Bra007361" - AT3G57830 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra007361AT3G57830 (E=3e-149) | leucine-rich repeat transmembrane protein kinase, putative (328 aa)    
Predicted Functional Partners:
Bra018898
AT3G20830 (E=9e-122) | protein kinase family protein (287 aa)
   
          0.450
Bra022782
AT2G41910 (E=2e-062) | protein kinase family protein (305 aa)
   
          0.442
Bra006265
AT5G14720 (E=5e-069) | protein kinase family protein (192 aa)
   
          0.432
Bra022800
AT2G41910 (E=1e-095) | protein kinase family protein (331 aa)
   
          0.421
Bra035740
AT3G20830 (E=4e-180) | protein kinase family protein (403 aa)
   
          0.418
Bra015604
AT5G12090 (E=9e-091) | protein kinase family protein (364 aa)
   
          0.407
Bra014070
AT2G42550 (E=4e-057) | protein kinase family protein (255 aa)
   
          0.406
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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