STRINGSTRING
Bra007461 protein (Brassica rapa) - STRING interaction network
"Bra007461" - AT3G47630 in Brassica rapa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
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Textmining
[Homology]
Score
Bra007461AT3G47630 (E=1e-094) | FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; EXPRESSED IN- 21 plant structures; EXPRESSED DURING- 13 growth stages; CONTAINS InterPro DOMAIN/s- Mitochondrial matrix Mmp37 (InterPro-IPR015222); Has 226 Blast hits to 226 proteins in 115 species- Archae - 0; Bacteria - 0; Metazoa - 96; Fungi - 92; Plants - 19; Viruses - 0; Other Eukaryotes - 19 (source- NCBI BLink). (289 aa)    
Predicted Functional Partners:
Bra033966
AT1G68000 (E=2e-060) ATPIS1, ATPIS | ATPIS1 (PHOSPHATIDYLINOSITOL SYNTHASE 1); CDP-diacylglycerol-inositol 3-phosphatidyltransferase (288 aa)
       
 
  0.561
Bra010739
AT4G38570 (E=1e-113) PIS2 | PIS2 (PROBABLE CDP-DIACYLGLYCEROL--INOSITOL 3-PHOSPHATIDYLTRANSFERASE 2); phosphotransferase, for other substituted phosphate groups (243 aa)
       
 
  0.561
Bra004274
AT1G68000 (E=3e-108) ATPIS1, ATPIS | ATPIS1 (PHOSPHATIDYLINOSITOL SYNTHASE 1); CDP-diacylglycerol-inositol 3-phosphatidyltransferase (229 aa)
       
 
  0.561
Bra004056
AT1G68000 (E=4e-114) ATPIS1, ATPIS | ATPIS1 (PHOSPHATIDYLINOSITOL SYNTHASE 1); CDP-diacylglycerol-inositol 3-phosphatidyltransferase (230 aa)
       
 
  0.561
Bra034506
AT4G22340 (E=2e-174) | phosphatidate cytidylyltransferase, putative / CDP-diglyceride synthetase, putative (419 aa)
       
 
  0.556
Bra027046
AT1G62430 (E=9e-228) ATCDS1 | ATCDS1; phosphatidate cytidylyltransferase (421 aa)
       
 
  0.556
Bra026404
AT4G26770 (E=1e-156) | phosphatidate cytidylyltransferase/ transferase, transferring phosphorus-containing groups (421 aa)
       
 
  0.556
Bra014480
AT3G60620 (E=1e-016) | phosphatidate cytidylyltransferase family protein (50 aa)
       
 
  0.556
Bra013612
AT4G22340 (E=1e-171) | phosphatidate cytidylyltransferase, putative / CDP-diglyceride synthetase, putative (393 aa)
       
 
  0.556
Bra007548
AT3G60620 (E=2e-111) | phosphatidate cytidylyltransferase family protein (420 aa)
       
 
  0.556
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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