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Bra007520 protein (Brassica rapa) - STRING interaction network
"Bra007520" - AT3G60250 in Brassica rapa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
Bra007520AT3G60250 (E=8e-108) CKB3 | CKB3; protein kinase regulator/ transcription factor binding ; Plays a complex role in regulating the basal catalytic activity of the alpha subunit (263 aa)    
Predicted Functional Partners:
Bra039942
AT2G23070 (E=8e-197) | casein kinase II alpha chain, putative (420 aa)
     
  0.977
Bra036806
AT3G50000 (E=1e-063) CKA2, ATCKA2 | CKA2 (CASEIN KINASE II, ALPHA CHAIN 2); kinase (337 aa)
     
  0.977
Bra036044
AT3G50000 (E=3e-183) CKA2, ATCKA2 | CKA2 (CASEIN KINASE II, ALPHA CHAIN 2); kinase (389 aa)
     
  0.977
Bra032182
AT2G23070 (E=1e-185) | casein kinase II alpha chain, putative (401 aa)
     
  0.977
Bra031829
AT5G67380 (E=3e-038) CKA1, ATCKA1 | CKA1 (CASEIN KINASE ALPHA 1); kinase (274 aa)
     
  0.977
Bra029986
AT3G50000 (E=1e-175) CKA2, ATCKA2 | CKA2 (CASEIN KINASE II, ALPHA CHAIN 2); kinase (329 aa)
     
  0.977
Bra025350
AT3G28730 (E=2e-239) ATHMG, SSRP1, NFD | ATHMG (ARABIDOPSIS THALIANA HIGH MOBILITY GROUP); transcription factor (658 aa)
     
  0.966
Bra033055
AT3G28730 (E=9e-172) ATHMG, SSRP1, NFD | ATHMG (ARABIDOPSIS THALIANA HIGH MOBILITY GROUP); transcription factor (623 aa)
     
  0.964
Bra035286
AT4G10710 (E=0.0) SPT16 | SPT16 (global transcription factor C) (963 aa)
     
  0.954
Bra000719
AT4G10710 (E=0.0) SPT16 | SPT16 (global transcription factor C) (1168 aa)
     
  0.954
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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